Welcome to metapredict’s documentation!¶
Contents:
- Getting Started with metapredict
- What is metapredict?
- How does metapredict work?
- But wait! I need the old metapredict predictions!!!
- So… how exactly was this more accurate metapredict network made?
- Generating AlphaFold2 pLDDT scores in metapredict
- What might the predicted confidence scores from AlphaFold2 be used for?
- Why is metapredict useful?
- How to cite metapredict
- Installation
- Known installation/execution issues
- macOS libiomp clash
- Testing
- Example datasets
- metapredict from the command-line
- Using the original metapredict network
- Predicting Disorder from Fasta Files
- Predicting Disorder from a Sequence
- Predicting AlphaFold2 Confidence Scores from a Fasta File
- Graphing Disorder from a Fasta file
- Quick Graphing
- Graphing using Uniprot ID
- Graphing disorder using the common name of a protein
- Graphing Predicted AlphaFold2 pLDDT Scores from a fasta file
- Predicting IDRs from a fasta file
- metapredict in Python
- Important update to predict_disorder_domains() function for V2.0 and above
- Predicting Disorder
- Predicting AlphaFold2 Confidence Scores
- Predicting Disorder Domains:
- Calculating Percent Disorder:
- Graphing Disorder
- Graphing AlphaFold2 Confidence Scores
- Predicting Disorder From a .fasta File:
- Predicting AlphaFold2 confidence scores From a .fasta File
- Predict Disorder Using Uniprot ID
- Predicting AlphaFold2 Confidence Scores Using Uniprot ID
- Generating Disorder Graphs From a .fasta File:
- Generating AlphaFold2 Confidence Score Graphs from fasta files
- Generating Graphs Using Uniprot ID
- Generating AlphaFold2 Confidnce Score Graphs Using Uniprot ID
- Predicting Disorder Domains using a Uniprot ID:
- Predicting Disorder Domains from external scores:
- Python Module Documentation
- Acknowledgements
- HELP! Metapredict isn’t working!
- Recent changes
- How to cite metapredict